a person in the record
Camille Marchet
Researcher
Supervised 1 doctoral student at Université de Lille; doctorate at Université de Rennes 1 in 2018 under Pierre Peterlongo. Linked to Wikidata and ORCID.
How to read the markscited by a repository's recordstated by Wikidata or indexed by OpenAlexclaimed on an ORCID list, or inferred
Advisors1
- cited by a thesis record
Pierre Peterlongo“From reads to transcripts: de novo methods for the analysis of transcriptome second and third generation sequencing.”
2018 · Université de Rennes 1 · doctoral
Students1
- cited by a thesis record
Thomas Baudeau“Studying the properties of viral long reads mapping methods”
2025 · Université de Lille · doctoral
The line above and below2 steps
The advisors of their advisors, four steps up at most, in the thesis records and on Wikidata, each kind marked; a person in both is listed once.
- 1 step up
cited by a thesis recordPierre Peterlongo
- 2 steps up
cited by a thesis recordMarie-France Sagotcited by a thesis recordMaxime Crochemore
Below them, within 3 steps, the record reaches 1 person: 1 cited by thesis records.
Theses1
- cited by a thesis record2018 · Université de Rennes 1 · doctoral · in English · the thesis's own page ›
Works1
2018 · held from 1 repository · a work missing?
- cited by HAL/TEL OAI's record2018 · doctoral thesis · HAL/TEL OAI
What their ORCID record lists
The works their own ORCID record lists, as they claim them: shown apart from the record's works, never checked or counted with them.
ORCID is asked for the list when this part is opened.
Papers in OpenAlex94
2014most in 2024: 172026
last at Centre National de la Recherche Scientifique, Université de Lille, Centre de Recherche en Informatique, Signal et Automatique de Lille, Centrale Lille Institut
writes on Genomics and Phylogenetic Studies, Algorithms and Data Compression, Fractal and DNA sequence analysis, Single-cell and spatial transcriptomics, RNA Research and Splicing
- indexed by OpenAlexcited 370
Critical Assessment of Metagenome Interpretation: the second round of challenges
2022 · Nature Methods · 100 authors - indexed by OpenAlexcited 121
Data structures based on k -mers for querying large collections of sequencing data sets
2020 · Genome Research · 6 authors - indexed by OpenAlex2016 · Nucleic Acids Research · 15 authorscited 91
- indexed by OpenAlexcited 77
REINDEER: efficient indexing of k -mer presence and abundance in sequencing datasets
2020 · Bioinformatics · 5 authors - indexed by OpenAlexcited 64
Scalable long read self-correction and assembly polishing with multiple sequence alignment
2021 · Scientific Reports · 5 authors - indexed by OpenAlex2023 · Genome biology · 4 authorscited 57
- indexed by OpenAlex2019 · Briefings in Bioinformatics · 8 authorscited 55
- indexed by OpenAlexcited 52
A de novo approach to disentangle partner identity and function in holobiont systems
2018 · Microbiome · 13 authors - indexed by OpenAlex2018 · Scientific Reports · 14 authorscited 45
- indexed by OpenAlexcited 43
Fractional Hitting Sets for Efficient and Lightweight Genomic Data Sketching
2015 · arXiv (Cornell University) · 4 authors
the 25 most cited of 94
- indexed by OpenAlexcited 42
Critical Assessment of Metagenome Interpretation - the second round of challenges
2021 · bioRxiv (Cold Spring Harbor Laboratory) · 100 authors - indexed by OpenAlex2021 · Bioinformatics · 3 authorscited 39
- indexed by OpenAlexcited 39
De novo clustering of long reads by gene from transcriptomics data
2018 · Nucleic Acids Research · 7 authors - indexed by OpenAlexcited 26
Scalable sequence database search using partitioned aggregated Bloom comb trees
2023 · Bioinformatics · 2 authors - indexed by OpenAlexcited 24
A resource-frugal probabilistic dictionary and applications in bioinformatics
2018 · Discrete Applied Mathematics · 5 authors - indexed by OpenAlex2017 · Algorithms for Molecular Biology · 8 authorscited 24
- indexed by OpenAlexcited 17
CONSENT: Scalable long read self-correction and assembly polishing with multiple sequence alignment
2019 · bioRxiv (Cold Spring Harbor Laboratory) · 5 authors - indexed by OpenAlexcited 11
Conway–Bromage–Lyndon (CBL): an exact, dynamic representation of k-mer sets
2024 · Bioinformatics · 4 authors - indexed by OpenAlex2019 · NAR Genomics and Bioinformatics · 7 authorscited 11
- indexed by OpenAlex2022 · bioRxiv (Cold Spring Harbor Laboratory) · 4 authorscited 10
- indexed by OpenAlex2024 · Genome biology · 11 authorscited 8
- indexed by OpenAlexcited 8
Data structures based on k -mers for querying large collections of sequencing data sets
2019 · HAL (Le Centre pour la Communication Scientifique Directe) · 6 authors - indexed by OpenAlex2016 · GigaScience · 16 authorscited 8
- indexed by OpenAlexcited 7
Clustering de Novo by Gene of Long Reads from Transcriptomics Data
2017 · bioRxiv (Cold Spring Harbor Laboratory) · 7 authors - indexed by OpenAlex2019 · HAL (Le Centre pour la Communication Scientifique Directe) · 3 authorscited 6
Sat beside the lineage4
jury member or referee, not advisor
- cited by a thesis record
Anna Diamant“Computational methodology for analysis of cell type specific RNA isoform expression with long read sequencing”
referee · 2026 · Université Côte d'Azur · doctoral - cited by a thesis recordjury member · 2024 · Université de Rennes · doctoral
- cited by a thesis record
Victor Epain“DNA fragment assembly, graph structures and chloroplast genome scaffolding : comparative analyses, formulations and implementations”
jury member · 2023 · Université de Rennes · doctoral - cited by a thesis record
Claudio Lorenzi“Design and implementation of bioinformatic tools for RNA sequencing data analysis”
jury member · 2021 · Université Montpellier · doctoral